PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_C794C1EEA.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 366aa    MW: 39249.5 Da    PI: 6.9517
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_C794C1EEA.3genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.25.8e-21269331163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++
  Traes_5DL_C794C1EEA.3 269 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 331
                            89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.8E-38118243No hitNo description
Gene3DG3DSA:1.20.5.1708.6E-19263328No hitNo description
SMARTSM003385.2E-21269333IPR004827Basic-leucine zipper domain
PfamPF001705.0E-20269331IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.082271334IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-10272328No hitNo description
CDDcd147027.05E-23274325No hitNo description
PROSITE patternPS000360276291IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MSCWLPVVIV AAATSTVIVL PEDEIINHLT KFVELLCNRF TKTKETVNMP MMPPYGSPPY  60
VIYPPGGIYA HPSMRPGAHP FAPYTMTSPN GNPDAAGTTT TAATAGGETN GKSSEGKEKS  120
PIKRSKGSLG SLNMITGKNC VEHGKTSGAS ANGTISQSGE SGSESSSEGS EANSQNDSQH  180
KESGQEQDGD VRSSQNGVSP SPSQAQLKQT LAIMQMPSSG PVPGPTTNLN IGMDYWANTA  240
SSSPALHGKV TPTAIPGAVA PTEPWMQDER ELKRQKRKQS NRDSARRSRL RKQAECEELA  300
QRAEVLKQEN ASLKDEVSRI RKEYDELLSK NSSLKDNVGD KQHKTDEAGL DNKLQHSGDD  360
SQKDTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1285291RRSRLRK
2285292RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ1944570.0FJ194457.1 Triticum aestivum bZip type transcription factor bZIP1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578746.11e-178PREDICTED: transcription factor HBP-1a-like
SwissprotQ501B21e-105BZP16_ARATH; bZIP transcription factor 16
TrEMBLW5FYL10.0W5FYL1_WHEAT; Uncharacterized protein
TrEMBLM8CL530.0M8CL53_AEGTA; Transcription factor HBP-1a
STRINGMLOC_63066.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.13e-83basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]